PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_019758
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 542aa    MW: 58778.7 Da    PI: 6.2236
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_019758genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.8e-30285343259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK  kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+
  DCAR_019758 285 TDGCQWRKYGQKIAKGNPCPRAYYRCTMAtGCPVRKQVQRCADDRSILITTYEGNHNHP 343
                  7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-33269345IPR003657WRKY domain
SuperFamilySSF1182907.19E-28277345IPR003657WRKY domain
PROSITE profilePS5081129.769279345IPR003657WRKY domain
SMARTSM007742.1E-36284344IPR003657WRKY domain
PfamPF031064.3E-27286343IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MAKPCGLTFL HHNNNLSPQS YIINSFPTQQ ESHWKAEARP MDLSPPRGSF QFQLSTAHDH  60
DQDRPDEMDF FARKRDDHDR DQSKVTDNLA SEADDHRDLS DFNVNTGLHL VTANTCSDHS  120
IVDDGLSPDS DDKKAKNELG ALQADLERTN IENHRLKDLL SQVTNNYNTL QMHLVTVMQQ  180
QSHKSADYEP EEFINLGLGG QRSAEADAEP SLSLPEGGEH IRSPANNMDH SSKEDDVDPG  240
SQNAWMGSHK VSRLNPSNSV DQATEATIRK ARVSVRARSE APMITDGCQW RKYGQKIAKG  300
NPCPRAYYRC TMATGCPVRK QVQRCADDRS ILITTYEGNH NHPLPPAAMA MASSTSSAAR  360
MLLSGSMPSA DGTINSNVLA RSFLPCSNNM ATISASAPFP TVTLDLTQNP NPLDCQRPQN  420
QFQLPFHNPQ QNVASSAALL PQIFSHALHN QSRFSGLQMS QDLVPPHQAG SLADTVNALT  480
ADPNFTAALA AAISSVIGGG SNPTGSPTNN VNVTQTPTNN GSLTTSNNNS NGNIRVTNSG  540
N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-22271347176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002269696.20.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-132WRKY6_ARATH; WRKY transcription factor 6
TrEMBLF6HIC70.0F6HIC7_VITVI; Putative uncharacterized protein
STRINGVIT_12s0059g00880.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-124WRKY family protein